Organism Overview: Blattabacterium sp. MADAR


 
nusA protein networkhttps://string-db.org/network/1074889.MADAR_001Transcription elongation factor NusA; Participates in both transcription termination and antitermination.
infB protein networkhttps://string-db.org/network/1074889.MADAR_002Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to [...]
aspS protein networkhttps://string-db.org/network/1074889.MADAR_003aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor [...]
ppa protein networkhttps://string-db.org/network/1074889.MADAR_004Inorganic diphosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
sucB protein networkhttps://string-db.org/network/1074889.MADAR_0052-oxoglutarate dehydrogenase, E2 component; Annotation based on TIGRFAM SucB_Actino protein motif and similarity to AA sequences in nr.
yjeF protein networkhttps://string-db.org/network/1074889.MADAR_006Putative kinase, ribokinase-like superfamily; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense o [...]
lnt protein networkhttps://string-db.org/network/1074889.MADAR_007Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrol [...]
mrdB protein networkhttps://string-db.org/network/1074889.MADAR_009Cell cycle protein; Annotation based on TIGRFAM rodA_shape protein motif and similarity to AA sequences in nr; Belongs to the SEDS family.
mrdA protein networkhttps://string-db.org/network/1074889.MADAR_010Annotation based on TIGRFAM pbp2_mrdA protein motif and similarity to AA sequences in nr.
MADAR_011 protein networkhttps://string-db.org/network/1074889.MADAR_011Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
mreC protein networkhttps://string-db.org/network/1074889.MADAR_012Putative rod shape-determining protein MreC; Annotation based on TIGRFAM mreC protein motif and similarity to AA sequences in nr.
mreB protein networkhttps://string-db.org/network/1074889.MADAR_013Putative rod shape-determining protein MreB; Annotation based on TIGRFAM mreB protein motif and similarity to AA sequences in nr.
folK protein networkhttps://string-db.org/network/1074889.MADAR_0142-amino-4-hydroxy-6- hydroxymethyldihydropteridine; Annotation based on TIGRFAM folK protein motif and similarity to AA sequences in nr.
MADAR_015 protein networkhttps://string-db.org/network/1074889.MADAR_015Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
MADAR_016 protein networkhttps://string-db.org/network/1074889.MADAR_016Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
argD protein networkhttps://string-db.org/network/1074889.MADAR_017Acetylornithine aminotransferase; Annotation based on TIGRFAM argD protein motif and similarity to AA sequences in nr; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase fami [...]
truA protein networkhttps://string-db.org/network/1074889.MADAR_018Putative tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
msbA protein networkhttps://string-db.org/network/1074889.MADAR_019ABC transporter, ATP-binding and permease protein; Annotation based on TIGRFAM MsbA_lipidA protein motif and similarity to AA sequences in nr.
MADAR_020 protein networkhttps://string-db.org/network/1074889.MADAR_020ABC transporter, ATP-binding protein; Annotation based on TIGRFAM urea_trans_UrtE protein motif and similarity to AA sequences in nr.
MADAR_021 protein networkhttps://string-db.org/network/1074889.MADAR_021Thiamine pyrophosphokinase; Annotation based on TIGRFAM thi_PPkinase protein motif and similarity to AA sequences in nr.
asnS protein networkhttps://string-db.org/network/1074889.MADAR_022asparaginyl-tRNA synthetase; Annotation based on similarity to AA sequences in nr.
mdh protein networkhttps://string-db.org/network/1074889.MADAR_023Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
gcvP protein networkhttps://string-db.org/network/1074889.MADAR_024Glycine cleavage system protein P; Annotation based on TIGRFAM gcvP protein motif and similarity to AA sequences in nr; Belongs to the GcvP family.
tsaD protein networkhttps://string-db.org/network/1074889.MADAR_025Putative glycoprotease; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer [...]
MADAR_026 protein networkhttps://string-db.org/network/1074889.MADAR_026Putative membrane-associated HD superfamily hydrolase; Annotation based on TIGRFAM HDIG protein motif and similarity to AA sequences in nr.
clpP protein networkhttps://string-db.org/network/1074889.MADAR_030ATP-dependent Clp protease proteolytic subunit 2; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degra [...]
rffH protein networkhttps://string-db.org/network/1074889.MADAR_031Glucose-1-phosphate uridylyltransferase; Annotation based on TIGRFAM rmlA_long protein motif and similarity to AA sequences in nr.
dut protein networkhttps://string-db.org/network/1074889.MADAR_032Deoxyuridine 5'-triphosphate nucleotidohydrolase; Annotation based on similarity to AA sequences in nr.
wzxC protein networkhttps://string-db.org/network/1074889.MADAR_033Polysaccharide biosynthesis protein; Annotation based on similarity to AA sequences in nr.
tatA-2 protein networkhttps://string-db.org/network/1074889.MADAR_034Putative Sec-independent protein translocase; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their [...]
mltD protein networkhttps://string-db.org/network/1074889.MADAR_035Putative membrane-bound lytic murein transglycosylase; Annotation based on similarity to AA sequences in nr.
recA protein networkhttps://string-db.org/network/1074889.MADAR_036recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of hom [...]
phnP protein networkhttps://string-db.org/network/1074889.MADAR_037Metal-dependent hydrolase; Annotation based on TIGRFAM PhnP protein motif and similarity to AA sequences in nr.
ccmC protein networkhttps://string-db.org/network/1074889.MADAR_038Annotation based on TIGRFAM cytochr_II_ccsB protein motif and similarity to AA sequences in nr.
MADAR_039 protein networkhttps://string-db.org/network/1074889.MADAR_039Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
alaS protein networkhttps://string-db.org/network/1074889.MADAR_040alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRN [...]
sucA protein networkhttps://string-db.org/network/1074889.MADAR_0412-oxoglutarate dehydrogenase, E1 component; Annotation based on TIGRFAM 2oxo_dh_E1 protein motif and similarity to AA sequences in nr.
sucB-2 protein networkhttps://string-db.org/network/1074889.MADAR_0422-oxoglutarate dehydrogenase, E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA an [...]
MADAR_043 protein networkhttps://string-db.org/network/1074889.MADAR_043Membrane protein; Annotation based on similarity to AA sequences in nr.
MADAR_044 protein networkhttps://string-db.org/network/1074889.MADAR_044Phospholipase/carboxylesterase family protein; Annotation based on similarity to AA sequences in nr.
sucC protein networkhttps://string-db.org/network/1074889.MADAR_045succinyl-CoA synthetase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus rep [...]
dnaX protein networkhttps://string-db.org/network/1074889.MADAR_046DNA polymerase III holoenzyme, tau and gamma; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3 [...]
clpB protein networkhttps://string-db.org/network/1074889.MADAR_047ATP-dependent Clp protease, ATP-binding subunit; Annotation based on TIGRFAM chaperone_ClpB protein motif and similarity to AA sequences in nr; Belongs to the ClpA/ClpB family.
MADAR_048 protein networkhttps://string-db.org/network/1074889.MADAR_048Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
MADAR_049 protein networkhttps://string-db.org/network/1074889.MADAR_049Membrane protease protein family protein; Annotation based on TIGRFAM hflK protein motif and similarity to AA sequences in nr.
MADAR_050 protein networkhttps://string-db.org/network/1074889.MADAR_050Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
MADAR_051 protein networkhttps://string-db.org/network/1074889.MADAR_051M16 family peptidase; Annotation based on similarity to AA sequences in nr.
MADAR_052 protein networkhttps://string-db.org/network/1074889.MADAR_052Putative peptidase; Annotation based on similarity to AA sequences in nr.
argF protein networkhttps://string-db.org/network/1074889.MADAR_053Ornithine carbamoyltransferase; Annotation based on TIGRFAM orni_carb_tr protein motif and similarity to AA sequences in nr; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
argB protein networkhttps://string-db.org/network/1074889.MADAR_054Acetylglutamate kinase; Annotation based on TIGRFAM argB protein motif and similarity to AA sequences in nr.
MADAR_055 protein networkhttps://string-db.org/network/1074889.MADAR_055Acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase; Annotation based on TIGRFAM DapE-ArgE protein motif and similarity to AA sequences in nr.
trxA protein networkhttps://string-db.org/network/1074889.MADAR_056Thioredoxin; Annotation based on TIGRFAM thioredoxin protein motif and similarity to AA sequences in nr; Belongs to the thioredoxin family.
ribB protein networkhttps://string-db.org/network/1074889.MADAR_0583,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. Belongs to the DHBP synthase family.
MADAR_059 protein networkhttps://string-db.org/network/1074889.MADAR_059Putative YjgP/YjgQ family permease; Annotation based on similarity to AA sequences in nr.
ftsK protein networkhttps://string-db.org/network/1074889.MADAR_060DNA translocase; Annotation based on TIGRFAM T7_EssCb_Firm protein motif and similarity to AA sequences in nr; Belongs to the FtsK/SpoIIIE/SftA family.
polA protein networkhttps://string-db.org/network/1074889.MADAR_062DNA polymerase I; Annotation based on TIGRFAM pola protein motif and similarity to AA sequences in nr.
metG protein networkhttps://string-db.org/network/1074889.MADAR_063methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
lon protein networkhttps://string-db.org/network/1074889.MADAR_065ATP-dependent protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cel [...]
ligA protein networkhttps://string-db.org/network/1074889.MADAR_066DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy sourc [...]
prmB protein networkhttps://string-db.org/network/1074889.MADAR_067Putative protoporphyrinogen oxidase; Annotation based on TIGRFAM RF_mod_PrmC protein motif and similarity to AA sequences in nr.
trmE protein networkhttps://string-db.org/network/1074889.MADAR_068tRNA modification GTPase; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, [...]
gltX protein networkhttps://string-db.org/network/1074889.MADAR_069glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end [...]
rpsF protein networkhttps://string-db.org/network/1074889.MADAR_07030S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
rpsR protein networkhttps://string-db.org/network/1074889.MADAR_071Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal p [...]
rplI protein networkhttps://string-db.org/network/1074889.MADAR_07250S ribosomal protein L9; Binds to the 23S rRNA.
mntH protein networkhttps://string-db.org/network/1074889.MADAR_073Mn2+/Fe2+ transporter, NRAMP family; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.
pheA protein networkhttps://string-db.org/network/1074889.MADAR_074Prephenate dehydratase; Annotation based on similarity to AA sequences in nr.
tyrB protein networkhttps://string-db.org/network/1074889.MADAR_075Aspartate/tyrosine/aromatic aminotransferase; Annotation based on TIGRFAM DapC_direct protein motif and similarity to AA sequences in nr.
tyrA protein networkhttps://string-db.org/network/1074889.MADAR_076Prephenate dehydrogenase; Annotation based on similarity to AA sequences in nr.
MADAR_077 protein networkhttps://string-db.org/network/1074889.MADAR_077Phospho-2-dehydro-3-deoxyheptonate aldolase (aroG)/chorismate mutase (pheA); Annotation based on TIGRFAM DAHP_synth_Bsub protein motif and similarity to AA sequences in nr.
metK protein networkhttps://string-db.org/network/1074889.MADAR_078S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet forma [...]
fabI protein networkhttps://string-db.org/network/1074889.MADAR_079Enoyl-[acyl-carrier-protein] reductase (NADH); Annotation based on similarity to AA sequences in nr.
rpe protein networkhttps://string-db.org/network/1074889.MADAR_080Ribulose-phosphate 3-epimerase; Annotation based on TIGRFAM rpe protein motif and similarity to AA sequences in nr; Belongs to the ribulose-phosphate 3-epimerase family.
dnaG protein networkhttps://string-db.org/network/1074889.MADAR_081DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family.
ahpC protein networkhttps://string-db.org/network/1074889.MADAR_082Alkyl hydroperoxide reductase, subunit C; Annotation based on TIGRFAM AhpC protein motif and similarity to AA sequences in nr.
miaB protein networkhttps://string-db.org/network/1074889.MADAR_083Putative 2-methylthioadenine synthetase; Annotation based on TIGRFAM MiaB-like-C protein motif and similarity to AA sequences in nr.
lipB protein networkhttps://string-db.org/network/1074889.MADAR_084Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can al [...]
lysS protein networkhttps://string-db.org/network/1074889.MADAR_085lysine-tRNA ligase; Annotation based on TIGRFAM lysS_bact protein motif and similarity to AA sequences in nr; Belongs to the class-II aminoacyl-tRNA synthetase family.
codA protein networkhttps://string-db.org/network/1074889.MADAR_086Cytosine deaminase; Annotation based on similarity to AA sequences in nr.
gidB protein networkhttps://string-db.org/network/1074889.MADAR_087Glucose-inhibited division protein B; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
aspC protein networkhttps://string-db.org/network/1074889.MADAR_088Aspartate aminotransferase; Annotation based on TIGRFAM DapC_direct protein motif and similarity to AA sequences in nr.
gltP protein networkhttps://string-db.org/network/1074889.MADAR_091Glutamate/aspartate:proton symporter; Annotation based on similarity to AA sequences in nr; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
rpsP protein networkhttps://string-db.org/network/1074889.MADAR_093Annotation based on TIGRFAM S16 protein motif and similarity to AA sequences in nr; Belongs to the bacterial ribosomal protein bS16 family.
bacA protein networkhttps://string-db.org/network/1074889.MADAR_094Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
gyrB protein networkhttps://string-db.org/network/1074889.MADAR_095DNA gyrase subunit B; Annotation based on TIGRFAM gyrB protein motif and similarity to AA sequences in nr.
trmD protein networkhttps://string-db.org/network/1074889.MADAR_096tRNA (guanine-N-(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.
engA protein networkhttps://string-db.org/network/1074889.MADAR_097GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) G [...]
ruvA protein networkhttps://string-db.org/network/1074889.MADAR_098Holliday junction DNA helicase motor protein; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promo [...]
MADAR_099 protein networkhttps://string-db.org/network/1074889.MADAR_099Phosphate sodium symporter; Annotation based on similarity to AA sequences in nr.
luxE protein networkhttps://string-db.org/network/1074889.MADAR_100LuxE family acyl-protein synthetase/acyl-CoA reductase-like protein; Annotation based on similarity to AA sequences in nr.
MADAR_101 protein networkhttps://string-db.org/network/1074889.MADAR_101Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
MADAR_102 protein networkhttps://string-db.org/network/1074889.MADAR_102Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
pheS protein networkhttps://string-db.org/network/1074889.MADAR_103phenylalanyl-tRNA synthetase alpha subunit; Annotation based on TIGRFAM pheS protein motif and similarity to AA sequences in nr; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA [...]
MADAR_105 protein networkhttps://string-db.org/network/1074889.MADAR_105Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
MADAR_106 protein networkhttps://string-db.org/network/1074889.MADAR_106Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
murB protein networkhttps://string-db.org/network/1074889.MADAR_107UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
pnp protein networkhttps://string-db.org/network/1074889.MADAR_108Purine nucleoside phosphorylase; Annotation based on TIGRFAM PNPH-PUNA-XAPA protein motif and similarity to AA sequences in nr.
mrp protein networkhttps://string-db.org/network/1074889.MADAR_109Mrp/Nbp35 family ATP-binding protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
acpT protein networkhttps://string-db.org/network/1074889.MADAR_110Putative phosphopantetheinyl transferase; Annotation based on similarity to AA sequences in nr; Belongs to the P-Pant transferase superfamily.
pnuC protein networkhttps://string-db.org/network/1074889.MADAR_111Nicotinamide mononucleotide transporter PnuC; Annotation based on TIGRFAM NMN_trans_PnuC protein motif and similarity to AA sequences in nr.
hisS protein networkhttps://string-db.org/network/1074889.MADAR_112histidyl-tRNA synthetase; Annotation based on TIGRFAM hisS protein motif and similarity to AA sequences in nr.
ftsZ protein networkhttps://string-db.org/network/1074889.MADAR_113Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the tim [...]
ftsA protein networkhttps://string-db.org/network/1074889.MADAR_114Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
ftsQ protein networkhttps://string-db.org/network/1074889.MADAR_115Cell division protein FtsQ; Annotation based on similarity to AA sequences in nr.
murC protein networkhttps://string-db.org/network/1074889.MADAR_116UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
murG protein networkhttps://string-db.org/network/1074889.MADAR_117Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide [...]
ftsW protein networkhttps://string-db.org/network/1074889.MADAR_118Rod shape-determining protein rodA; Annotation based on TIGRFAM ftsW protein motif and similarity to AA sequences in nr; Belongs to the SEDS family.
murD protein networkhttps://string-db.org/network/1074889.MADAR_119Putative UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the [...]
mraY protein networkhttps://string-db.org/network/1074889.MADAR_120phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY s [...]
murE protein networkhttps://string-db.org/network/1074889.MADAR_121UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG [...]
ftsI protein networkhttps://string-db.org/network/1074889.MADAR_122FtsI-like transpeptidase/penicillin-binding protein; Annotation based on TIGRFAM spoVD_pbp protein motif and similarity to AA sequences in nr.
MADAR_123 protein networkhttps://string-db.org/network/1074889.MADAR_123Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
rsmH protein networkhttps://string-db.org/network/1074889.MADAR_12416S rRNA m(4)C1402 methyltransferase, SAM-dependent; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
tgt protein networkhttps://string-db.org/network/1074889.MADAR_125Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in [...]
MADAR_126 protein networkhttps://string-db.org/network/1074889.MADAR_126Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
degQ protein networkhttps://string-db.org/network/1074889.MADAR_127Serine protease DegQ; Annotation based on TIGRFAM degP_htrA_DO protein motif and similarity to AA sequences in nr.
dapF protein networkhttps://string-db.org/network/1074889.MADAR_128Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of t [...]
frvX protein networkhttps://string-db.org/network/1074889.MADAR_129M42 family peptidase; Annotation based on TIGRFAM glu_aminopep protein motif and similarity to AA sequences in nr.
MADAR_130 protein networkhttps://string-db.org/network/1074889.MADAR_130Putative ATP/GTP-binding protein; Annotation based on TIGRFAM TIGR00092 protein motif and similarity to AA sequences in nr.
tatC protein networkhttps://string-db.org/network/1074889.MADAR_131Sec-independent protein translocase protein TatC, putative; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine m [...]
ompA protein networkhttps://string-db.org/network/1074889.MADAR_132Outer membrane protein; Annotation based on similarity to AA sequences in nr.
smpB protein networkhttps://string-db.org/network/1074889.MADAR_133SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tm [...]
tktB protein networkhttps://string-db.org/network/1074889.MADAR_134Annotation based on TIGRFAM tktlase_bact protein motif and similarity to AA sequences in nr.
dxs protein networkhttps://string-db.org/network/1074889.MADAR_135DXP synthase; Annotation based on TIGRFAM dxs protein motif and similarity to AA sequences in nr.
MADAR_136 protein networkhttps://string-db.org/network/1074889.MADAR_136Nucleoside-triphosphate diphosphatase; Annotation based on similarity to AA sequences in nr.
aroA protein networkhttps://string-db.org/network/1074889.MADAR_1375-enolpyruvyl shikimate-3-phosphate synthase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl [...]
MADAR_138 protein networkhttps://string-db.org/network/1074889.MADAR_138Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
rpsT protein networkhttps://string-db.org/network/1074889.MADAR_14030S ribosomal protein S20; Binds directly to 16S ribosomal RNA.
murI protein networkhttps://string-db.org/network/1074889.MADAR_141Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
maeB protein networkhttps://string-db.org/network/1074889.MADAR_142Malic enzyme, NADP-dependent; Annotation based on similarity to AA sequences in nr.
ccoH protein networkhttps://string-db.org/network/1074889.MADAR_143Cytochrome cbb3 oxidase maturation protein CcoH; Annotation based on similarity to AA sequences in nr.
ccoP protein networkhttps://string-db.org/network/1074889.MADAR_144ccoP cytochrome c oxidase, cbb3-type, subunit III; Annotation based on TIGRFAM ccoP protein motif and similarity to AA sequences in nr.
ccoQ protein networkhttps://string-db.org/network/1074889.MADAR_145ccoQ cytochrome c oxidase, cbb3-type, subunit IV; Annotation based on TIGRFAM cbb3_Q_epsi protein motif and similarity to AA sequences in nr.
MADAR_146 protein networkhttps://string-db.org/network/1074889.MADAR_146ccoN/ccoO cytochrome c oxidase, cbb3-type, subunit I and II; Annotation based on TIGRFAM ccoN protein motif and similarity to AA sequences in nr; Belongs to the heme-copper respiratory oxidase fa [...]
ccoS protein networkhttps://string-db.org/network/1074889.MADAR_147Cytochrome cbb3 oxidase maturation protein CcoS; Annotation based on TIGRFAM ccoS protein motif and similarity to AA sequences in nr.
ccoI protein networkhttps://string-db.org/network/1074889.MADAR_148Cytochrome cbb3 oxidase maturation protein CcoI; Annotation based on TIGRFAM ATPase-IB_hvy protein motif and similarity to AA sequences in nr.
gcvH protein networkhttps://string-db.org/network/1074889.MADAR_149Glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
MADAR_150 protein networkhttps://string-db.org/network/1074889.MADAR_150Hemagglutinin; Annotation based on TIGRFAM flagell_FlgJ protein motif and similarity to AA sequences in nr.
yggS protein networkhttps://string-db.org/network/1074889.MADAR_151Pyridoxal 5'-phosphate binding protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
serC protein networkhttps://string-db.org/network/1074889.MADAR_152Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belon [...]
tilS protein networkhttps://string-db.org/network/1074889.MADAR_153Putative tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cy [...]
aroK protein networkhttps://string-db.org/network/1074889.MADAR_154Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
xthA protein networkhttps://string-db.org/network/1074889.MADAR_156Exodeoxyribonuclease III; Annotation based on TIGRFAM xth protein motif and similarity to AA sequences in nr.
hisG protein networkhttps://string-db.org/network/1074889.MADAR_157ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate [...]
hisD protein networkhttps://string-db.org/network/1074889.MADAR_158Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
hisC protein networkhttps://string-db.org/network/1074889.MADAR_159Histidinol-phosphate aminotransferase; Annotation based on TIGRFAM hisC protein motif and similarity to AA sequences in nr; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase [...]
hisB protein networkhttps://string-db.org/network/1074889.MADAR_160Imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Annotation based on TIGRFAM hisB_Nterm protein motif and similarity to AA sequences in nr; Belongs to the imidazoleglycerol-phosph [...]
hisH protein networkhttps://string-db.org/network/1074889.MADAR_161Imidazole glycerol phosphate synthase subunit HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glu [...]
hisA protein networkhttps://string-db.org/network/1074889.MADAR_162Phosphoribosylformimino-5-aminoimidazole carboxamide; Annotation based on TIGRFAM TIGR00007 protein motif and similarity to AA sequences in nr.
hisF protein networkhttps://string-db.org/network/1074889.MADAR_163Imidazole glycerol phosphate synthase subunit hisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that prod [...]
hisI protein networkhttps://string-db.org/network/1074889.MADAR_164Bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Annotation based on TIGRFAM histidine_hisI protein motif and similarity to AA sequences in nr; In the N-terminal sect [...]
queE protein networkhttps://string-db.org/network/1074889.MADAR_165Hypothetical protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynth [...]
folD protein networkhttps://string-db.org/network/1074889.MADAR_166Putative methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofol [...]
rsmA protein networkhttps://string-db.org/network/1074889.MADAR_16716S rRNA dimethyladenosine transferase, SAM-dependent; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30 [...]
serS protein networkhttps://string-db.org/network/1074889.MADAR_168serine-tRNA synthetase; Annotation based on TIGRFAM serS protein motif and similarity to AA sequences in nr.
metF protein networkhttps://string-db.org/network/1074889.MADAR_1695,10-methylenetetrahydrofolate reductase; Annotation based on TIGRFAM fadh2 protein motif and similarity to AA sequences in nr; Belongs to the methylenetetrahydrofolate reductase family.
pdhB protein networkhttps://string-db.org/network/1074889.MADAR_170Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
MADAR_171 protein networkhttps://string-db.org/network/1074889.MADAR_171Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
MADAR_172 protein networkhttps://string-db.org/network/1074889.MADAR_172Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
folA protein networkhttps://string-db.org/network/1074889.MADAR_173Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.
valS protein networkhttps://string-db.org/network/1074889.MADAR_174valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors [...]
MADAR_175 protein networkhttps://string-db.org/network/1074889.MADAR_175Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
MADAR_176 protein networkhttps://string-db.org/network/1074889.MADAR_176Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
ndk protein networkhttps://string-db.org/network/1074889.MADAR_177Nucleoside-diphosphate kinase; Annotation based on similarity to AA sequences in nr; Belongs to the NDK family.
sucA-2 protein networkhttps://string-db.org/network/1074889.MADAR_1782-oxoglutarate dehydrogenase E1 component; Annotation based on TIGRFAM 2oxo_dh_E1 protein motif and similarity to AA sequences in nr.
ilvE protein networkhttps://string-db.org/network/1074889.MADAR_179Branched-chain amino acid aminotransferase; Annotation based on TIGRFAM ilvE_II protein motif and similarity to AA sequences in nr.
argS protein networkhttps://string-db.org/network/1074889.MADAR_180arginyl-tRNA synthetase; Annotation based on TIGRFAM argS protein motif and similarity to AA sequences in nr.
ffh protein networkhttps://string-db.org/network/1074889.MADAR_181Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nasce [...]
glpA protein networkhttps://string-db.org/network/1074889.MADAR_182Glycerol-3-phosphate dehydrogenase; Annotation based on TIGRFAM glycerol3P_GlpA protein motif and similarity to AA sequences in nr.
glpK protein networkhttps://string-db.org/network/1074889.MADAR_183Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
glpF protein networkhttps://string-db.org/network/1074889.MADAR_184Putative glycerol diffusion channel; Annotation based on TIGRFAM MIP protein motif and similarity to AA sequences in nr; Belongs to the MIP/aquaporin (TC 1.A.8) family.
thrS protein networkhttps://string-db.org/network/1074889.MADAR_185threonyl-tRNA synthetase; Annotation based on TIGRFAM thrS protein motif and similarity to AA sequences in nr.
infC protein networkhttps://string-db.org/network/1074889.MADAR_186Translation initiation factor IF-3; Annotation based on TIGRFAM infC protein motif and similarity to AA sequences in nr; Belongs to the IF-3 family.
rpmI protein networkhttps://string-db.org/network/1074889.MADAR_187Ribosomal protein L35; Annotation based on TIGRFAM rpmI_bact protein motif and similarity to AA sequences in nr; Belongs to the bacterial ribosomal protein bL35 family.
rplT protein networkhttps://string-db.org/network/1074889.MADAR_18850S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing func [...]
MADAR_190 protein networkhttps://string-db.org/network/1074889.MADAR_190Holliday junction resolvase-like protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
dapD protein networkhttps://string-db.org/network/1074889.MADAR_1912, 3, 4, 5-tetrahydropyridine-2, 6-dicarboxylate N-succinyltransferase; Annotation based on TIGRFAM dapD protein motif and similarity to AA sequences in nr; Belongs to the transferase hexapeptide [...]
rimN protein networkhttps://string-db.org/network/1074889.MADAR_192Sua5/YciO/YrdC/YwlC family protein; Annotation based on TIGRFAM TIGR00057 protein motif and similarity to AA sequences in nr; Belongs to the SUA5 family.
cca protein networkhttps://string-db.org/network/1074889.MADAR_193Annotation based on TIGRFAM tRNA_CCA_actino protein motif and similarity to AA sequences in nr; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
MADAR_194 protein networkhttps://string-db.org/network/1074889.MADAR_194Phosphoesterase domain-containing protein; Annotation based on similarity to AA sequences in nr.
MADAR_195 protein networkhttps://string-db.org/network/1074889.MADAR_195Thioredoxin; Annotation based on similarity to AA sequences in nr.
MADAR_196 protein networkhttps://string-db.org/network/1074889.MADAR_196Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
MADAR_197 protein networkhttps://string-db.org/network/1074889.MADAR_197Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.
lipA protein networkhttps://string-db.org/network/1074889.MADAR_198Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, there [...]
MADAR_199 protein networkhttps://string-db.org/network/1074889.MADAR_199Putative helicase; Annotation based on TIGRFAM recB protein motif and similarity to AA sequences in nr.
fbaA protein networkhttps://string-db.org/network/1074889.MADAR_200Fructose 1,6-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphos [...]
accD protein networkhttps://string-db.org/network/1074889.MADAR_201acetyl-CoA carboxylase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and [...]
guaA protein networkhttps://string-db.org/network/1074889.MADAR_202Bifunctional GMP synthase/glutamine amidotransferase protein; Catalyzes the synthesis of GMP from XMP.
purD protein networkhttps://string-db.org/network/1074889.MADAR_203Phosphoribosylamine--glycine ligase; Annotation based on TIGRFAM purD protein motif and similarity to AA sequences in nr; Belongs to the GARS family.
purH protein networkhttps://string-db.org/network/1074889.MADAR_204Phosphoribosylaminoimidazole carboxamide formyltransferase/IMP cyclohydrolase; Annotation based on TIGRFAM purH protein motif and similarity to AA sequences in nr.
purN protein networkhttps://string-db.org/network/1074889.MADAR_205Phosphoribosylglycinamide formyltransferase; Annotation based on TIGRFAM PurN protein motif and similarity to AA sequences in nr.
purM protein networkhttps://string-db.org/network/1074889.MADAR_206Phosphoribosylaminoimidazole synthetase; Annotation based on TIGRFAM purM protein motif and similarity to AA sequences in nr.
purF protein networkhttps://string-db.org/network/1074889.MADAR_207Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
purC protein networkhttps://string-db.org/network/1074889.MADAR_208Phosphoribosylamidoimidazole-succinocarboxamide synthase; Annotation based on TIGRFAM purC protein motif and similarity to AA sequences in nr; Belongs to the SAICAR synthetase family.
purE protein networkhttps://string-db.org/network/1074889.MADAR_209Phosphoribosylaminoimidazole carboxylase catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).
purL protein networkhttps://string-db.org/network/1074889.MADAR_210Annotation based on TIGRFAM FGAM-synthase protein motif and similarity to AA sequences in nr.
purB protein networkhttps://string-db.org/network/1074889.MADAR_211Adenylosuccinate lyase; Annotation based on TIGRFAM purB protein motif and similarity to AA sequences in nr; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
purA protein networkhttps://string-db.org/network/1074889.MADAR_212Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to t [...]
ruvB protein networkhttps://string-db.org/network/1074889.MADAR_213Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand [...]
surE protein networkhttps://string-db.org/network/1074889.MADAR_214Acid phosphatase, survival protein; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
prc protein networkhttps://string-db.org/network/1074889.MADAR_215Putative periplasmic tail-specific proteinase; Annotation based on TIGRFAM prc protein motif and similarity to AA sequences in nr; Belongs to the peptidase S41A family.
gyrA protein networkhttps://string-db.org/network/1074889.MADAR_216DNA gyrase A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in a [...]
aroB protein networkhttps://string-db.org/network/1074889.MADAR_2173-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).
dedA protein networkhttps://string-db.org/network/1074889.MADAR_218Putative membrane-associated protein; Annotation based on similarity to AA sequences in nr.
tadA protein networkhttps://string-db.org/network/1074889.MADAR_219A34-tRNA adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
rplY protein networkhttps://string-db.org/network/1074889.MADAR_220Putative ribosomal L25p family stress protein; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribos [...]
prsA protein networkhttps://string-db.org/network/1074889.MADAR_221Ribose-phosphate pyrophosphokinase; Annotation based on TIGRFAM ribP_PPkin protein motif and similarity to AA sequences in nr.
thyA protein networkhttps://string-db.org/network/1074889.MADAR_222Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate ( [...]
thrA protein networkhttps://string-db.org/network/1074889.MADAR_223Aspartokinase/homoserine dehydrogenase; Annotation based on TIGRFAM asp_kinases protein motif and similarity to AA sequences in nr.
ureA protein networkhttps://string-db.org/network/1074889.MADAR_224Bifunctional urease gamma/beta subunit; Annotation based on TIGRFAM urease_gam protein motif and similarity to AA sequences in nr; Belongs to the urease gamma subunit family.
ureC protein networkhttps://string-db.org/network/1074889.MADAR_225Urease, alpha subunit; Annotation based on TIGRFAM urease_alph protein motif and similarity to AA sequences in nr.
MADAR_227 protein networkhttps://string-db.org/network/1074889.MADAR_227dCMP deaminase; Annotation based on TIGRFAM ComEB protein motif and similarity to AA sequences in nr.
spoU protein networkhttps://string-db.org/network/1074889.MADAR_228(guanosine-2'-O-)-methyltransferase; Annotation based on TIGRFAM rRNA_methyl_3 protein motif and similarity to AA sequences in nr.
rnhA protein networkhttps://string-db.org/network/1074889.MADAR_229Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
plsC protein networkhttps://string-db.org/network/1074889.MADAR_2301-acyl-sn-glycerol-3-phosphate acyltransferase; Annotation based on TIGRFAM AGP_acyltrn protein motif and similarity to AA sequences in nr.
fbp protein networkhttps://string-db.org/network/1074889.MADAR_231Fructose-1,6-bisphosphatase; Annotation based on similarity to AA sequences in nr; Belongs to the FBPase class 1 family.
marC protein networkhttps://string-db.org/network/1074889.MADAR_232MarC family integral membrane protein; Annotation based on TIGRFAM TIGR00427 protein motif and similarity to AA sequences in nr.
pyrF protein networkhttps://string-db.org/network/1074889.MADAR_233Bifunctional orotate phosphoribosyltransferase/orotidine 5'-phosphate decarboxylase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to [...]
pyrD protein networkhttps://string-db.org/network/1074889.MADAR_234Dihydroorotate dehydrogenase 1A; Catalyzes the conversion of dihydroorotate to orotate.
proS protein networkhttps://string-db.org/network/1074889.MADAR_235prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRN [...]
rpmF protein networkhttps://string-db.org/network/1074889.MADAR_23650S ribosomal protein L32; Annotation based on TIGRFAM rpmF_bact protein motif and similarity to AA sequences in nr; Belongs to the bacterial ribosomal protein bL32 family.
accB protein networkhttps://string-db.org/network/1074889.MADAR_237Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the c [...]
accC protein networkhttps://string-db.org/network/1074889.MADAR_238acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein [...]
prfA protein networkhttps://string-db.org/network/1074889.MADAR_239Peptide chain release factor 1; Annotation based on TIGRFAM prfA protein motif and similarity to AA sequences in nr.
MADAR_240 protein networkhttps://string-db.org/network/1074889.MADAR_240Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
rho protein networkhttps://string-db.org/network/1074889.MADAR_241Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and re [...]
MADAR_243 protein networkhttps://string-db.org/network/1074889.MADAR_243Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
MADAR_246 protein networkhttps://string-db.org/network/1074889.MADAR_246Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
rpmB protein networkhttps://string-db.org/network/1074889.MADAR_247Annotation based on TIGRFAM L28 protein motif and similarity to AA sequences in nr; Belongs to the bacterial ribosomal protein bL28 family.
rpmG protein networkhttps://string-db.org/network/1074889.MADAR_24850S ribosomal protein L33; Annotation based on TIGRFAM rpmG_bact protein motif and similarity to AA sequences in nr; Belongs to the bacterial ribosomal protein bL33 family.
MADAR_249 protein networkhttps://string-db.org/network/1074889.MADAR_249Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
ftsY protein networkhttps://string-db.org/network/1074889.MADAR_250Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the [...]
htpG protein networkhttps://string-db.org/network/1074889.MADAR_251Heat shock protein 90; Annotation based on similarity to AA sequences in nr.
exoX protein networkhttps://string-db.org/network/1074889.MADAR_252Putative DNA polymerase III epsilon chain; Annotation based on TIGRFAM dinG_rel protein motif and similarity to AA sequences in nr.
pssA protein networkhttps://string-db.org/network/1074889.MADAR_253CDP-diacylglycerol--serine O-phosphatidyltransferase; Annotation based on TIGRFAM pssA protein motif and similarity to AA sequences in nr.
ybeY protein networkhttps://string-db.org/network/1074889.MADAR_254Hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
gidA protein networkhttps://string-db.org/network/1074889.MADAR_255Glucose-inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s( [...]
MADAR_256 protein networkhttps://string-db.org/network/1074889.MADAR_256Uridine kinase; Annotation based on similarity to AA sequences in nr.
fumC protein networkhttps://string-db.org/network/1074889.MADAR_257Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
tatD protein networkhttps://string-db.org/network/1074889.MADAR_258Sec-independent protein translocase protein TatD; Annotation based on TIGRFAM TIGR00010 protein motif and similarity to AA sequences in nr.
fabD protein networkhttps://string-db.org/network/1074889.MADAR_259Malonyl CoA-acyl carrier protein transacylase; Annotation based on TIGRFAM fabD protein motif and similarity to AA sequences in nr.
MADAR_260 protein networkhttps://string-db.org/network/1074889.MADAR_260Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
gltA protein networkhttps://string-db.org/network/1074889.MADAR_261Citrate synthase; Annotation based on TIGRFAM cit_synth_I protein motif and similarity to AA sequences in nr; Belongs to the citrate synthase family.
rng protein networkhttps://string-db.org/network/1074889.MADAR_263Annotation based on TIGRFAM RNaseEG protein motif and similarity to AA sequences in nr.
MADAR_264 protein networkhttps://string-db.org/network/1074889.MADAR_264DNA-binding protein HU; Annotation based on TIGRFAM hip protein motif and similarity to AA sequences in nr; Belongs to the bacterial histone-like protein family.
mutY protein networkhttps://string-db.org/network/1074889.MADAR_265A/G-specific adenine glycosylase; Annotation based on TIGRFAM mutY protein motif and similarity to AA sequences in nr.
MADAR_266 protein networkhttps://string-db.org/network/1074889.MADAR_266Putative transmembrane CorC/HlyC family transporter; Annotation based on TIGRFAM GldE protein motif and similarity to AA sequences in nr.
MADAR_267 protein networkhttps://string-db.org/network/1074889.MADAR_267TPR domain-containing protein; Annotation based on similarity to AA sequences in nr.
ribE protein networkhttps://string-db.org/network/1074889.MADAR_268Riboflavin synthase subunit beta; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is [...]
mutL protein networkhttps://string-db.org/network/1074889.MADAR_269Putative DNA mismatch repair protein; Annotation based on TIGRFAM mutl protein motif and similarity to AA sequences in nr; Belongs to the DNA mismatch repair MutL/HexB family.
MADAR_270 protein networkhttps://string-db.org/network/1074889.MADAR_270Rhomboid family protein; Annotation based on similarity to AA sequences in nr.
MADAR_271 protein networkhttps://string-db.org/network/1074889.MADAR_271Signal peptidase I; Annotation based on TIGRFAM sigpep_I_bact protein motif and similarity to AA sequences in nr; Belongs to the peptidase S26 family.
dapB protein networkhttps://string-db.org/network/1074889.MADAR_272Dihydrodipicolinate reductase; Annotation based on TIGRFAM dapB protein motif and similarity to AA sequences in nr; Belongs to the DapB family.
trmU protein networkhttps://string-db.org/network/1074889.MADAR_274tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
dnaJ protein networkhttps://string-db.org/network/1074889.MADAR_275Chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomo [...]
grpE protein networkhttps://string-db.org/network/1074889.MADAR_276Chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucle [...]
trpS protein networkhttps://string-db.org/network/1074889.MADAR_277tryptophan--tRNA ligase; Annotation based on TIGRFAM trpS protein motif and similarity to AA sequences in nr; Belongs to the class-I aminoacyl-tRNA synthetase family.
atpG protein networkhttps://string-db.org/network/1074889.MADAR_278ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the f [...]
atpA protein networkhttps://string-db.org/network/1074889.MADAR_279ATP synthase F1 subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
atpH protein networkhttps://string-db.org/network/1074889.MADAR_280ATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the e [...]
atpF protein networkhttps://string-db.org/network/1074889.MADAR_281ATP synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
atpE protein networkhttps://string-db.org/network/1074889.MADAR_282ATP synthase F0 subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extram [...]
atpB protein networkhttps://string-db.org/network/1074889.MADAR_283ATP synthase A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.
cysS protein networkhttps://string-db.org/network/1074889.MADAR_284cysteinyl-tRNA synthetase; Annotation based on TIGRFAM cysS protein motif and similarity to AA sequences in nr; Belongs to the class-I aminoacyl-tRNA synthetase family.
folE protein networkhttps://string-db.org/network/1074889.MADAR_285GTP cyclohydrolase I; Annotation based on TIGRFAM folE protein motif and similarity to AA sequences in nr.
nadE protein networkhttps://string-db.org/network/1074889.MADAR_286NH(3)-dependent NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source.
MADAR_287 protein networkhttps://string-db.org/network/1074889.MADAR_287Peptidase M22, glycoprotease; Annotation based on TIGRFAM bact_YeaZ protein motif and similarity to AA sequences in nr.
hemC protein networkhttps://string-db.org/network/1074889.MADAR_288Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.
ktrB protein networkhttps://string-db.org/network/1074889.MADAR_289K+ uptake transporter subunit KtrB; Annotation based on TIGRFAM 2a38 protein motif and similarity to AA sequences in nr.
ktrA protein networkhttps://string-db.org/network/1074889.MADAR_290K+ uptake transporter subunit KtrA; Annotation based on similarity to AA sequences in nr.
hemD protein networkhttps://string-db.org/network/1074889.MADAR_291uroporphyrinogen-III synthase; Annotation based on similarity to AA sequences in nr.
MADAR_292 protein networkhttps://string-db.org/network/1074889.MADAR_292Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
MADAR_293 protein networkhttps://string-db.org/network/1074889.MADAR_293Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
MADAR_294 protein networkhttps://string-db.org/network/1074889.MADAR_294Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
nrfD protein networkhttps://string-db.org/network/1074889.MADAR_295Molybdopterin oxidoreductase membrane subunit; Annotation based on similarity to AA sequences in nr.
nrfC protein networkhttps://string-db.org/network/1074889.MADAR_296Molybdopterin oxidoreductase, iron-sulfur binding subunit; Annotation based on TIGRFAM cyt_nit_nrfC protein motif and similarity to AA sequences in nr.
MADAR_297 protein networkhttps://string-db.org/network/1074889.MADAR_297Cytochrome c; Annotation based on similarity to AA sequences in nr.
carB protein networkhttps://string-db.org/network/1074889.MADAR_298Carbamoyl-phosphate synthase large subunit; Annotation based on TIGRFAM CPSaseII_lrg protein motif and similarity to AA sequences in nr.
carA protein networkhttps://string-db.org/network/1074889.MADAR_299Carbamoyl phosphate synthase small subunit; Annotation based on TIGRFAM CPSaseIIsmall protein motif and similarity to AA sequences in nr; Belongs to the CarA family.
argD-2 protein networkhttps://string-db.org/network/1074889.MADAR_300Acetylornithine aminotransferase; Annotation based on TIGRFAM argD protein motif and similarity to AA sequences in nr; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase fami [...]
argC protein networkhttps://string-db.org/network/1074889.MADAR_301N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydroge [...]
MADAR_302 protein networkhttps://string-db.org/network/1074889.MADAR_302Argininosuccinate synthase(argG)/acetyltransferase activity of N-acetylglutamate synthase (argA); Annotation based on TIGRFAM argG protein motif and similarity to AA sequences in nr.
polc protein networkhttps://string-db.org/network/1074889.MADAR_303DNA-directed DNA polymerase; Annotation based on TIGRFAM polc protein motif and similarity to AA sequences in nr.
rpsA protein networkhttps://string-db.org/network/1074889.MADAR_30430S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.
nrdA protein networkhttps://string-db.org/network/1074889.MADAR_305Ribonucleoside-diphosphate reductase subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
MADAR_308 protein networkhttps://string-db.org/network/1074889.MADAR_308Cell wall-associated hydrolase; Annotation based on similarity to AA sequences in nr.
queA protein networkhttps://string-db.org/network/1074889.MADAR_313S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ [...]
ispB protein networkhttps://string-db.org/network/1074889.MADAR_314Polyprenyl synthetase; Annotation based on TIGRFAM GerC3_HepT protein motif and similarity to AA sequences in nr; Belongs to the FPP/GGPP synthase family.
topA protein networkhttps://string-db.org/network/1074889.MADAR_315Putative DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one s [...]
MADAR_316 protein networkhttps://string-db.org/network/1074889.MADAR_316Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
rsmI protein networkhttps://string-db.org/network/1074889.MADAR_317Putative methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
asd protein networkhttps://string-db.org/network/1074889.MADAR_318Aspartate-semialdehyde dehydrogenase; Annotation based on TIGRFAM asd_B protein motif and similarity to AA sequences in nr; Belongs to the aspartate-semialdehyde dehydrogenase family.
gmk protein networkhttps://string-db.org/network/1074889.MADAR_319Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
rpiB protein networkhttps://string-db.org/network/1074889.MADAR_322Ribose 5-phosphate isomerase B; Annotation based on TIGRFAM rpiB_lacA_lacB protein motif and similarity to AA sequences in nr.
pgk protein networkhttps://string-db.org/network/1074889.MADAR_323Phosphoglycerate kinase; Annotation based on similarity to AA sequences in nr; Belongs to the phosphoglycerate kinase family.
sodA protein networkhttps://string-db.org/network/1074889.MADAR_324Superoxide dismutase, iron/manganese-dependent; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide [...]
folB protein networkhttps://string-db.org/network/1074889.MADAR_325Putative dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
glmS protein networkhttps://string-db.org/network/1074889.MADAR_327Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
glgA protein networkhttps://string-db.org/network/1074889.MADAR_328Glycogen synthase-related protein; Annotation based on TIGRFAM glgA protein motif and similarity to AA sequences in nr.
rnr protein networkhttps://string-db.org/network/1074889.MADAR_329Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.
coaD protein networkhttps://string-db.org/network/1074889.MADAR_330Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD [...]
MADAR_331 protein networkhttps://string-db.org/network/1074889.MADAR_331PSP1 domain-containing protein; Annotation based on similarity to AA sequences in nr.
mrcA protein networkhttps://string-db.org/network/1074889.MADAR_332Annotation based on TIGRFAM PBP_1a_fam protein motif and similarity to AA sequences in nr.
serA protein networkhttps://string-db.org/network/1074889.MADAR_333Phosphoglycerate dehydrogenase; Annotation based on TIGRFAM PGDH protein motif and similarity to AA sequences in nr; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
MADAR_334 protein networkhttps://string-db.org/network/1074889.MADAR_334Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr; Belongs to the 4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family.
cysI protein networkhttps://string-db.org/network/1074889.MADAR_335Sulfite reductase (NADPH) hemoprotein subunit beta; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities req [...]
cysJ protein networkhttps://string-db.org/network/1074889.MADAR_336Sulfite reductase; Annotation based on TIGRFAM cysJ protein motif and similarity to AA sequences in nr.
cysG protein networkhttps://string-db.org/network/1074889.MADAR_337Siroheme synthase; Annotation based on TIGRFAM cobA_cysG_Cterm protein motif and similarity to AA sequences in nr; Belongs to the precorrin methyltransferase family.
cysK protein networkhttps://string-db.org/network/1074889.MADAR_338Cysteine synthase A; Annotation based on TIGRFAM cysK protein motif and similarity to AA sequences in nr; Belongs to the cysteine synthase/cystathionine beta- synthase family.
cysE protein networkhttps://string-db.org/network/1074889.MADAR_339Putative serine O-acetyltransferase; Annotation based on TIGRFAM cysE protein motif and similarity to AA sequences in nr.
cysN protein networkhttps://string-db.org/network/1074889.MADAR_340Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase [...]
cysD protein networkhttps://string-db.org/network/1074889.MADAR_341Sulfate adenylyltransferase subunit 2; Annotation based on TIGRFAM CysD protein motif and similarity to AA sequences in nr.
cysH protein networkhttps://string-db.org/network/1074889.MADAR_342Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
icd protein networkhttps://string-db.org/network/1074889.MADAR_343Isocitrate dehydrogenase (NADP+); Annotation based on TIGRFAM nadp_idh_euk protein motif and similarity to AA sequences in nr; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
menE protein networkhttps://string-db.org/network/1074889.MADAR_344Putative O-succinylbenzoate--CoA ligase; Annotation based on similarity to AA sequences in nr.
menC protein networkhttps://string-db.org/network/1074889.MADAR_345O-succinylbenzoate synthase; Annotation based on TIGRFAM menC_gamma protein motif and similarity to AA sequences in nr; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
MADAR_346 protein networkhttps://string-db.org/network/1074889.MADAR_346Beta-lactamase domain-containing protein; Annotation based on similarity to AA sequences in nr.
menA protein networkhttps://string-db.org/network/1074889.MADAR_3471,4-Dihydroxy-2-naphthoic acid (DHNA)-octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.
menB protein networkhttps://string-db.org/network/1074889.MADAR_3481,4-Dihydroxy-2-naphthoyl-CoA (DHNA-CoA) synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB [...]
MADAR_349 protein networkhttps://string-db.org/network/1074889.MADAR_349Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
MADAR_350 protein networkhttps://string-db.org/network/1074889.MADAR_350Putative Na+/H+ antiporter; Annotation based on TIGRFAM NhaD protein motif and similarity to AA sequences in nr.
eno protein networkhttps://string-db.org/network/1074889.MADAR_351Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
rplQ protein networkhttps://string-db.org/network/1074889.MADAR_352Putative 50S ribosomal protein L17; Annotation based on TIGRFAM L17 protein motif and similarity to AA sequences in nr.
rpoA protein networkhttps://string-db.org/network/1074889.MADAR_353DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
rpsD protein networkhttps://string-db.org/network/1074889.MADAR_35430S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
rpsK protein networkhttps://string-db.org/network/1074889.MADAR_35530S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belon [...]
rpsM protein networkhttps://string-db.org/network/1074889.MADAR_35630S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 [...]
rpmJ protein networkhttps://string-db.org/network/1074889.MADAR_357Ribosomal protein L36; Annotation based on similarity to AA sequences in nr; Belongs to the bacterial ribosomal protein bL36 family.
infA protein networkhttps://string-db.org/network/1074889.MADAR_358Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl- [...]
secY protein networkhttps://string-db.org/network/1074889.MADAR_359Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at t [...]
rplO protein networkhttps://string-db.org/network/1074889.MADAR_360Putative 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
rpsE protein networkhttps://string-db.org/network/1074889.MADAR_36130S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 fam [...]
rplR protein networkhttps://string-db.org/network/1074889.MADAR_36250S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protubera [...]
rplF protein networkhttps://string-db.org/network/1074889.MADAR_36350S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the t [...]
rpsH protein networkhttps://string-db.org/network/1074889.MADAR_36430S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to [...]
rpsN protein networkhttps://string-db.org/network/1074889.MADAR_36530S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the un [...]
rplE protein networkhttps://string-db.org/network/1074889.MADAR_36650S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance [...]
rplX protein networkhttps://string-db.org/network/1074889.MADAR_36750S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.
rplN protein networkhttps://string-db.org/network/1074889.MADAR_36850S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
rpsQ protein networkhttps://string-db.org/network/1074889.MADAR_36930S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
rhlE protein networkhttps://string-db.org/network/1074889.MADAR_37050S ribosomal protein L29; Annotation based on similarity to AA sequences in nr.
rplP protein networkhttps://string-db.org/network/1074889.MADAR_37150S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.
rpsC protein networkhttps://string-db.org/network/1074889.MADAR_37230S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
rplV protein networkhttps://string-db.org/network/1074889.MADAR_37350S ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g., L4, L17, and L20. It is important during the early stages of 5 [...]
rpsS protein networkhttps://string-db.org/network/1074889.MADAR_37430S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
rplB protein networkhttps://string-db.org/network/1074889.MADAR_37550S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It [...]
rplW protein networkhttps://string-db.org/network/1074889.MADAR_37650S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main dock [...]
rplD protein networkhttps://string-db.org/network/1074889.MADAR_37750S ribosomal protein L4; Forms part of the polypeptide exit tunnel.
rplC protein networkhttps://string-db.org/network/1074889.MADAR_37850S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal rib [...]
rpsJ protein networkhttps://string-db.org/network/1074889.MADAR_37930S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
fusA protein networkhttps://string-db.org/network/1074889.MADAR_380Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) [...]
rpsG protein networkhttps://string-db.org/network/1074889.MADAR_38130S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit inte [...]
rpsL protein networkhttps://string-db.org/network/1074889.MADAR_38230S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S an [...]
map protein networkhttps://string-db.org/network/1074889.MADAR_383Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharg [...]
pgm protein networkhttps://string-db.org/network/1074889.MADAR_384Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
tsf protein networkhttps://string-db.org/network/1074889.MADAR_385Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the [...]
rpsB protein networkhttps://string-db.org/network/1074889.MADAR_38630S ribosomal protein S2; Annotation based on TIGRFAM rpsB_bact protein motif and similarity to AA sequences in nr; Belongs to the universal ribosomal protein uS2 family.
rpsI protein networkhttps://string-db.org/network/1074889.MADAR_387Annotation based on TIGRFAM arch_S9P protein motif and similarity to AA sequences in nr; Belongs to the universal ribosomal protein uS9 family.
rplM protein networkhttps://string-db.org/network/1074889.MADAR_38850S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages [...]
dnaK protein networkhttps://string-db.org/network/1074889.MADAR_389dnaK protein; Acts as a chaperone; Belongs to the heat shock protein 70 family.
psd protein networkhttps://string-db.org/network/1074889.MADAR_390Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
cdsA protein networkhttps://string-db.org/network/1074889.MADAR_391Phosphatidate cytidylyltransferase; Annotation based on similarity to AA sequences in nr.
ftsH protein networkhttps://string-db.org/network/1074889.MADAR_392AAA-metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; [...]
birA protein networkhttps://string-db.org/network/1074889.MADAR_393biotin-(acetyl-CoA carboxylase) ligase; Annotation based on TIGRFAM birA_ligase protein motif and similarity to AA sequences in nr.
yidC protein networkhttps://string-db.org/network/1074889.MADAR_394Putative inner membrane protein translocase component YidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in [...]
pyrG protein networkhttps://string-db.org/network/1074889.MADAR_395CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the [...]
obgE protein networkhttps://string-db.org/network/1074889.MADAR_397DNA-binding GTPase involved in cell partioning; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hyd [...]
adk protein networkhttps://string-db.org/network/1074889.MADAR_398Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolis [...]
lpd protein networkhttps://string-db.org/network/1074889.MADAR_399Dihydrolipoamide dehydrogenase; Annotation based on TIGRFAM lipoamide_DH protein motif and similarity to AA sequences in nr.
fsaB protein networkhttps://string-db.org/network/1074889.MADAR_400Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
MADAR_401 protein networkhttps://string-db.org/network/1074889.MADAR_401Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
MADAR_402 protein networkhttps://string-db.org/network/1074889.MADAR_402Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
ftnA protein networkhttps://string-db.org/network/1074889.MADAR_403Ferritin, major cytoplasmic iron storage protein; Iron-storage protein.
dapA protein networkhttps://string-db.org/network/1074889.MADAR_404Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
ykfA protein networkhttps://string-db.org/network/1074889.MADAR_405RNP-1 RNA-binding protein; Annotation based on TIGRFAM SF-CC1 protein motif and similarity to AA sequences in nr.
pncB protein networkhttps://string-db.org/network/1074889.MADAR_406Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase [...]
miaB-2 protein networkhttps://string-db.org/network/1074889.MADAR_407RNA modification protein; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 [...]
ntrC protein networkhttps://string-db.org/network/1074889.MADAR_408Transcriptional regulator, sigma-54-related protein; Annotation based on TIGRFAM ntrC protein motif and similarity to AA sequences in nr.
secG protein networkhttps://string-db.org/network/1074889.MADAR_409Preprotein translocase subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
groES protein networkhttps://string-db.org/network/1074889.MADAR_410Chaperone GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.
groL protein networkhttps://string-db.org/network/1074889.MADAR_41160 kDa chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
MADAR_412 protein networkhttps://string-db.org/network/1074889.MADAR_412Putative hydrolase; Annotation based on TIGRFAM YrbI-phosphatas protein motif and similarity to AA sequences in nr.
MADAR_413 protein networkhttps://string-db.org/network/1074889.MADAR_413Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
mdlA protein networkhttps://string-db.org/network/1074889.MADAR_414ABC transporter, ATP-binding protein; Annotation based on TIGRFAM MsbA_rel protein motif and similarity to AA sequences in nr.
nusB protein networkhttps://string-db.org/network/1074889.MADAR_415Antitermination protein NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ri [...]
yajC protein networkhttps://string-db.org/network/1074889.MADAR_416Preprotein translocase, YajC subunit; Annotation based on TIGRFAM yajC protein motif and similarity to AA sequences in nr.
coaE protein networkhttps://string-db.org/network/1074889.MADAR_417Putative dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
MADAR_419 protein networkhttps://string-db.org/network/1074889.MADAR_419Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
ndh protein networkhttps://string-db.org/network/1074889.MADAR_420Putative type II NADH dehydrogenase; Annotation based on TIGRFAM Nterm_to_SelD protein motif and similarity to AA sequences in nr.
entC protein networkhttps://string-db.org/network/1074889.MADAR_421Isochorismate synthase entC; Annotation based on TIGRFAM isochor_syn protein motif and similarity to AA sequences in nr.
MADAR_422 protein networkhttps://string-db.org/network/1074889.MADAR_422Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr; similar to ybdB.
idi protein networkhttps://string-db.org/network/1074889.MADAR_423Putative isopentenyl-diphosphate delta-isomerase; Annotation based on TIGRFAM IPP_isom_1 protein motif and similarity to AA sequences in nr.
sscR protein networkhttps://string-db.org/network/1074889.MADAR_4246-pyruvoyl tetrahydrobiopterin synthase; Annotation based on TIGRFAM 6PTHBS protein motif and similarity to AA sequences in nr.
gcvT protein networkhttps://string-db.org/network/1074889.MADAR_425Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine.
matE protein networkhttps://string-db.org/network/1074889.MADAR_426Multi Antimicrobial Extrusion (MATE) family efflux pump; Annotation based on TIGRFAM matE protein motif and similarity to AA sequences in nr.
recQ protein networkhttps://string-db.org/network/1074889.MADAR_427ATP-dependent RNA helicase; Annotation based on TIGRFAM recQ protein motif and similarity to AA sequences in nr; Belongs to the DEAD box helicase family.
aroC protein networkhttps://string-db.org/network/1074889.MADAR_428Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch poin [...]
miaA protein networkhttps://string-db.org/network/1074889.MADAR_429tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to th [...]
folC protein networkhttps://string-db.org/network/1074889.MADAR_431Putative folylpolyglutamate synthase; Annotation based on TIGRFAM folC protein motif and similarity to AA sequences in nr; Belongs to the folylpolyglutamate synthase family.
glnS protein networkhttps://string-db.org/network/1074889.MADAR_432glutaminyl-tRNA synthetase; Annotation based on TIGRFAM glnS protein motif and similarity to AA sequences in nr.
rpoC protein networkhttps://string-db.org/network/1074889.MADAR_433DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
rpoB protein networkhttps://string-db.org/network/1074889.MADAR_434DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
rplL protein networkhttps://string-db.org/network/1074889.MADAR_43550S ribosomal protein L7+L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the ba [...]
rplJ protein networkhttps://string-db.org/network/1074889.MADAR_436Putative 50S ribosomal protein L10; Annotation based on similarity to AA sequences in nr.
rplA protein networkhttps://string-db.org/network/1074889.MADAR_43750S ribosomal protein L1; Annotation based on TIGRFAM rplA_bact protein motif and similarity to AA sequences in nr; Belongs to the universal ribosomal protein uL1 family.
rplK protein networkhttps://string-db.org/network/1074889.MADAR_438Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
nusG protein networkhttps://string-db.org/network/1074889.MADAR_439Transcription termination/antitermination factor NusG; Participates in transcription elongation, termination and antitermination.
MADAR_440 protein networkhttps://string-db.org/network/1074889.MADAR_440Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr; Belongs to the SecE/SEC61-gamma family.
tuf protein networkhttps://string-db.org/network/1074889.MADAR_442Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
lspA protein networkhttps://string-db.org/network/1074889.MADAR_447Putative signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins.
ileS protein networkhttps://string-db.org/network/1074889.MADAR_448isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such e [...]
mutS protein networkhttps://string-db.org/network/1074889.MADAR_449Putative DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak A [...]
guaB protein networkhttps://string-db.org/network/1074889.MADAR_452Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesi [...]
MADAR_453 protein networkhttps://string-db.org/network/1074889.MADAR_453Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
rplS protein networkhttps://string-db.org/network/1074889.MADAR_45450S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
MADAR_455 protein networkhttps://string-db.org/network/1074889.MADAR_455Phosphoglucomutase/phosphomannomutase; Annotation based on TIGRFAM Arch_GlmM protein motif and similarity to AA sequences in nr.
dnaB protein networkhttps://string-db.org/network/1074889.MADAR_456Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
accA protein networkhttps://string-db.org/network/1074889.MADAR_457acetyl-CoA carboxylase, carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its ca [...]
sdhB protein networkhttps://string-db.org/network/1074889.MADAR_458Succinate dehydrogenase/fumarate reductase, iron-sulfur protein; Annotation based on TIGRFAM dhsB protein motif and similarity to AA sequences in nr.
sdhA protein networkhttps://string-db.org/network/1074889.MADAR_459Succinate dehydrogenase flavoprotein subunit; Annotation based on TIGRFAM sdhA_Bsu protein motif and similarity to AA sequences in nr.
sdhC protein networkhttps://string-db.org/network/1074889.MADAR_460Succinate dehydrogenase subunit C/fumarate reductase; Annotation based on TIGRFAM sdhC_b558_fam protein motif and similarity to AA sequences in nr.
iscS protein networkhttps://string-db.org/network/1074889.MADAR_461Cysteine desulfurase; Annotation based on TIGRFAM FeS_nifS protein motif and similarity to AA sequences in nr.
rny protein networkhttps://string-db.org/network/1074889.MADAR_462Phosphodiesterase; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family.
MADAR_463 protein networkhttps://string-db.org/network/1074889.MADAR_463Putative deoxyhypusine synthase; Annotation based on TIGRFAM dhys protein motif and similarity to AA sequences in nr.
lpdA protein networkhttps://string-db.org/network/1074889.MADAR_464Dihydrolipoamide dehydrogenase; Annotation based on TIGRFAM lipoamide_DH protein motif and similarity to AA sequences in nr.
MADAR_465 protein networkhttps://string-db.org/network/1074889.MADAR_465Potassium transporter peripheral membrane component; Annotation based on similarity to AA sequences in nr.
MADAR_466 protein networkhttps://string-db.org/network/1074889.MADAR_4664Fe-4S ferredoxin, iron-sulfur binding protein; Annotation based on similarity to AA sequences in nr.
MADAR_467 protein networkhttps://string-db.org/network/1074889.MADAR_467Phosphoserine aminotransferase; Annotation based on similarity to AA sequences in nr.
aroE protein networkhttps://string-db.org/network/1074889.MADAR_469Shikimate 5-dehydrogenase; Annotation based on TIGRFAM aroE protein motif and similarity to AA sequences in nr.
rpsU protein networkhttps://string-db.org/network/1074889.MADAR_470Annotation based on TIGRFAM S21p protein motif and similarity to AA sequences in nr; Belongs to the bacterial ribosomal protein bS21 family.
recG protein networkhttps://string-db.org/network/1074889.MADAR_472ATP-dependent DNA helicase; Annotation based on TIGRFAM recG protein motif and similarity to AA sequences in nr.
uvrD protein networkhttps://string-db.org/network/1074889.MADAR_473Putative helicase; Annotation based on TIGRFAM pcrA protein motif and similarity to AA sequences in nr.
fieF protein networkhttps://string-db.org/network/1074889.MADAR_474Cation diffusion facilitator family transporter; Annotation based on TIGRFAM CDF protein motif and similarity to AA sequences in nr; Belongs to the cation diffusion facilitator (CDF) transporter [...]
MADAR_475 protein networkhttps://string-db.org/network/1074889.MADAR_475Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
murA protein networkhttps://string-db.org/network/1074889.MADAR_476UDP-N-acetylglucosamine-1- carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
lpxP protein networkhttps://string-db.org/network/1074889.MADAR_477Thermonuclease family protein; Annotation based on similarity to AA sequences in nr.
greA protein networkhttps://string-db.org/network/1074889.MADAR_478Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trappi [...]
hinT protein networkhttps://string-db.org/network/1074889.MADAR_479HIT family protein; Annotation based on similarity to AA sequences in nr.
yigI protein networkhttps://string-db.org/network/1074889.MADAR_480Pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.
MADAR_481 protein networkhttps://string-db.org/network/1074889.MADAR_481Hydrolase protein of the alpha/beta superfamily; Annotation based on TIGRFAM protocat_pcaD protein motif and similarity to AA sequences in nr.
rseP protein networkhttps://string-db.org/network/1074889.MADAR_483Membrane-associated zinc metalloprotease; Annotation based on TIGRFAM TIGR00054 protein motif and similarity to AA sequences in nr.
feoA protein networkhttps://string-db.org/network/1074889.MADAR_484Ferrous iron transport protein A; Annotation based on similarity to AA sequences in nr.
feoB protein networkhttps://string-db.org/network/1074889.MADAR_485Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) [...]
ddl protein networkhttps://string-db.org/network/1074889.MADAR_486D-alanyl-alanine synthetase A; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
MADAR_487 protein networkhttps://string-db.org/network/1074889.MADAR_487Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
rluD protein networkhttps://string-db.org/network/1074889.MADAR_488Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
mgtE protein networkhttps://string-db.org/network/1074889.MADAR_489Putative Mg2+ transporter; Acts as a magnesium transporter.
leuS protein networkhttps://string-db.org/network/1074889.MADAR_490leucyl-tRNA synthetase; Annotation based on TIGRFAM leuS_bact protein motif and similarity to AA sequences in nr; Belongs to the class-I aminoacyl-tRNA synthetase family.
gdhA protein networkhttps://string-db.org/network/1074889.MADAR_491Glutamate dehydrogenase; Annotation based on similarity to AA sequences in nr; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
pyrH protein networkhttps://string-db.org/network/1074889.MADAR_492Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
frr protein networkhttps://string-db.org/network/1074889.MADAR_493Ribosome recycling factor; Annotation based on TIGRFAM frr protein motif and similarity to AA sequences in nr.
asnS-2 protein networkhttps://string-db.org/network/1074889.MADAR_494asparaginyl-tRNA synthetase; Annotation based on TIGRFAM asnS protein motif and similarity to AA sequences in nr.
rpoN protein networkhttps://string-db.org/network/1074889.MADAR_495RNA polymerase factor sigma-54; Annotation based on TIGRFAM rpoN_sigma protein motif and similarity to AA sequences in nr.
sad protein networkhttps://string-db.org/network/1074889.MADAR_496Succinate-semialdehyde dehydrogenase; Annotation based on TIGRFAM BADH protein motif and similarity to AA sequences in nr; Belongs to the aldehyde dehydrogenase family.
sufE protein networkhttps://string-db.org/network/1074889.MADAR_497Putative SufE Fe/S-cluster-related protein; Annotation based on TIGRFAM FeS_syn_CsdE protein motif and similarity to AA sequences in nr.
metE protein networkhttps://string-db.org/network/1074889.MADAR_4985-methyltetrahydropteroyltriglutamate-- homocysteine; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vit [...]
MADAR_499 protein networkhttps://string-db.org/network/1074889.MADAR_499Putative sugar phosphate nucleotidyl transferase; Annotation based on TIGRFAM alt_bact_glmU protein motif and similarity to AA sequences in nr.
rpmE protein networkhttps://string-db.org/network/1074889.MADAR_500Annotation based on TIGRFAM L31 protein motif and similarity to AA sequences in nr; Belongs to the bacterial ribosomal protein bL31 family.
fabH protein networkhttps://string-db.org/network/1074889.MADAR_5013-oxoacyl-[acyl-carrier-protein] synthase III; Annotation based on TIGRFAM fabH protein motif and similarity to AA sequences in nr.
MADAR_503 protein networkhttps://string-db.org/network/1074889.MADAR_503Putative auxin-regulated protein; Annotation based on similarity to AA sequences in nr.
rpsO protein networkhttps://string-db.org/network/1074889.MADAR_504Putative 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
pnp-2 protein networkhttps://string-db.org/network/1074889.MADAR_505Polynucleotide phosphorylase/polyadenylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
rpoD protein networkhttps://string-db.org/network/1074889.MADAR_506RNA polymerase sigma-70 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
tpiA protein networkhttps://string-db.org/network/1074889.MADAR_508Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to th [...]
MADAR_509 protein networkhttps://string-db.org/network/1074889.MADAR_509Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
folP protein networkhttps://string-db.org/network/1074889.MADAR_510Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate [...]
dacA protein networkhttps://string-db.org/network/1074889.MADAR_511Putative transmembrane protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.
murF protein networkhttps://string-db.org/network/1074889.MADAR_512UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of mure [...]
acoA protein networkhttps://string-db.org/network/1074889.MADAR_513Pyruvate dehydrogenase E1 component, alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
aceF protein networkhttps://string-db.org/network/1074889.MADAR_514Dihydrolipoamide acyltransferase E2 component; Annotation based on TIGRFAM PDHac_trf_mito protein motif and similarity to AA sequences in nr.
MADAR_515 protein networkhttps://string-db.org/network/1074889.MADAR_515Integral membrane protein TerC family; Annotation based on TIGRFAM R_switched_YkoY protein motif and similarity to AA sequences in nr.
msbA-2 protein networkhttps://string-db.org/network/1074889.MADAR_516Annotation based on TIGRFAM MsbA_lipidA protein motif and similarity to AA sequences in nr.
tatA protein networkhttps://string-db.org/network/1074889.MADAR_518Putative Sec-independent-protein-translocase protein TatA/E; Annotation based on similarity to AA sequences in nr.
ppiD protein networkhttps://string-db.org/network/1074889.MADAR_519Peptidylprolyl cis-trans isomerase; Annotation based on similarity to AA sequences in nr.
MADAR_520 protein networkhttps://string-db.org/network/1074889.MADAR_520Putative transmembrane CBS domain transporter; Annotation based on TIGRFAM GldE protein motif and similarity to AA sequences in nr.
MADAR_521 protein networkhttps://string-db.org/network/1074889.MADAR_521Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
MADAR_523 protein networkhttps://string-db.org/network/1074889.MADAR_523Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
yaeT protein networkhttps://string-db.org/network/1074889.MADAR_524Outer membrane protein; Annotation based on TIGRFAM OM_YaeT protein motif and similarity to AA sequences in nr; probable bacterial surface antigen.
uppS protein networkhttps://string-db.org/network/1074889.MADAR_525Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
ppnK protein networkhttps://string-db.org/network/1074889.MADAR_526Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosph [...]
MADAR_528 protein networkhttps://string-db.org/network/1074889.MADAR_528Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr; Belongs to the pseudouridine synthase RsuA family.
aroD protein networkhttps://string-db.org/network/1074889.MADAR_5293-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.
ysxC protein networkhttps://string-db.org/network/1074889.MADAR_530Ribosome biogenesis GTP-binding protein YsxC; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase sup [...]
MADAR_531 protein networkhttps://string-db.org/network/1074889.MADAR_531Alpha/beta fold family hydrolase; Annotation based on TIGRFAM protocat_pcaD protein motif and similarity to AA sequences in nr.
rnc protein networkhttps://string-db.org/network/1074889.MADAR_532Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some m [...]
fabF protein networkhttps://string-db.org/network/1074889.MADAR_533Putative 3-oxoacyl-(acyl-carrier-protein) synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
acpP protein networkhttps://string-db.org/network/1074889.MADAR_534Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
pck protein networkhttps://string-db.org/network/1074889.MADAR_535Phosphoenolpyruvate carboxykinase; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucl [...]
ribC protein networkhttps://string-db.org/network/1074889.MADAR_536Riboflavin synthase subunit alpha; Annotation based on TIGRFAM ribE protein motif and similarity to AA sequences in nr.
pdxA protein networkhttps://string-db.org/network/1074889.MADAR_5374-hydroxythreonin-phosphate dehydrogenase; Annotation based on TIGRFAM pdxA protein motif and similarity to AA sequences in nr; Belongs to the PdxA family.
atpC protein networkhttps://string-db.org/network/1074889.MADAR_538F0F1 ATP synthase subunit epsilon; Annotation based on TIGRFAM ATP_synt_epsi protein motif and similarity to AA sequences in nr.
atpD protein networkhttps://string-db.org/network/1074889.MADAR_539ATP synthase F1 subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
ribF protein networkhttps://string-db.org/network/1074889.MADAR_540Riboflavin biosynthesis protein; Annotation based on TIGRFAM ribF protein motif and similarity to AA sequences in nr; Belongs to the ribF family.
MADAR_541 protein networkhttps://string-db.org/network/1074889.MADAR_541Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
tyrS protein networkhttps://string-db.org/network/1074889.MADAR_542Putative tyrosyl-tRNA synthetase 1; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the accep [...]
clpB-2 protein networkhttps://string-db.org/network/1074889.MADAR_543Putative heat shock ClpB protein; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Be [...]
prfB protein networkhttps://string-db.org/network/1074889.MADAR_544Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
speA protein networkhttps://string-db.org/network/1074889.MADAR_545Arginine decarboxylase; Annotation based on TIGRFAM speA protein motif and similarity to AA sequences in nr.
speB protein networkhttps://string-db.org/network/1074889.MADAR_546Agmatinase; Annotation based on TIGRFAM agmatinase protein motif and similarity to AA sequences in nr; Belongs to the arginase family.
cmk protein networkhttps://string-db.org/network/1074889.MADAR_547Cytidylate kinase; Annotation based on TIGRFAM cmk protein motif and similarity to AA sequences in nr.
fabG protein networkhttps://string-db.org/network/1074889.MADAR_5483-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cy [...]
menD protein networkhttps://string-db.org/network/1074889.MADAR_5492-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent [...]
MADAR_550 protein networkhttps://string-db.org/network/1074889.MADAR_550Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
secA protein networkhttps://string-db.org/network/1074889.MADAR_551Preprotein translocase subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the t [...]
MADAR_552 protein networkhttps://string-db.org/network/1074889.MADAR_552Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
fmt protein networkhttps://string-db.org/network/1074889.MADAR_553Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethi [...]
hupB protein networkhttps://string-db.org/network/1074889.MADAR_554Histone-like DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental condi [...]
pdxH protein networkhttps://string-db.org/network/1074889.MADAR_555Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).
dnaN protein networkhttps://string-db.org/network/1074889.MADAR_557DNA polymerase III, beta subunit; Annotation based on TIGRFAM dnan protein motif and similarity to AA sequences in nr.
pheT protein networkhttps://string-db.org/network/1074889.MADAR_558phenylalanyl-tRNA synthetase beta subunit; Annotation based on TIGRFAM pheT_bact protein motif and similarity to AA sequences in nr; Belongs to the phenylalanyl-tRNA synthetase beta subunit famil [...]
glyS protein networkhttps://string-db.org/network/1074889.MADAR_559glycyl-tRNA synthetase; Annotation based on TIGRFAM glyS_dimeric protein motif and similarity to AA sequences in nr.
trxB protein networkhttps://string-db.org/network/1074889.MADAR_560Thioredoxin reductase; Annotation based on TIGRFAM TRX_reduct protein motif and similarity to AA sequences in nr.
MADAR_561 protein networkhttps://string-db.org/network/1074889.MADAR_561Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
gapA protein networkhttps://string-db.org/network/1074889.MADAR_562Glyceraldehyde 3-phosphate dehydrogenase; Annotation based on TIGRFAM GAPDH-I protein motif and similarity to AA sequences in nr; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
lepA protein networkhttps://string-db.org/network/1074889.MADAR_563GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codo [...]
pth protein networkhttps://string-db.org/network/1074889.MADAR_565peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
sucD protein networkhttps://string-db.org/network/1074889.MADAR_566succinyl-CoA ligase (ADP-forming) subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP an [...]
fabZ protein networkhttps://string-db.org/network/1074889.MADAR_5673-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in l [...]
MADAR_568 protein networkhttps://string-db.org/network/1074889.MADAR_568Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
rpmH protein networkhttps://string-db.org/network/1074889.MADAR_56950S ribosomal protein L34; Annotation based on TIGRFAM rpmH_bact protein motif and similarity to AA sequences in nr; Belongs to the bacterial ribosomal protein bL34 family.
MADAR_570 protein networkhttps://string-db.org/network/1074889.MADAR_570M14 family peptidase; Annotation based on similarity to AA sequences in nr.
MADAR_571 protein networkhttps://string-db.org/network/1074889.MADAR_571Hypothetical protein; Predicted using Glimmer v3.02 and annotation based on similarity to AA sequences in nr.
rbn protein networkhttps://string-db.org/network/1074889.MADAR_572Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs [...]
nfsA protein networkhttps://string-db.org/network/1074889.MADAR_573Ribosome-binding factor A; Annotation based on similarity to AA sequences in nr.
rpmA protein networkhttps://string-db.org/network/1074889.MADAR_576Annotation based on TIGRFAM L27 protein motif and similarity to AA sequences in nr; Belongs to the bacterial ribosomal protein bL27 family.
rplU protein networkhttps://string-db.org/network/1074889.MADAR_57750S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
sufS protein networkhttps://string-db.org/network/1074889.MADAR_578Cysteine desulfurase; Annotation based on TIGRFAM sufS protein motif and similarity to AA sequences in nr; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
sufD protein networkhttps://string-db.org/network/1074889.MADAR_579SufBCD Fe-S assembly scaffold, FADH2-dependent; Annotation based on TIGRFAM sufD protein motif and similarity to AA sequences in nr.
sufC protein networkhttps://string-db.org/network/1074889.MADAR_580SufBCD Fe-S assembly scaffold, FADH2-dependent; Annotation based on TIGRFAM sufC protein motif and similarity to AA sequences in nr.
sufB protein networkhttps://string-db.org/network/1074889.MADAR_581SufBCD Fe-S assembly scaffold, FADH2-dependent; Annotation based on TIGRFAM sufB protein motif and similarity to AA sequences in nr.
sufA protein networkhttps://string-db.org/network/1074889.MADAR_582Scaffold protein for iron-sulfur cluster assembly; Annotation based on TIGRFAM TIGR00049 protein motif and similarity to AA sequences in nr; Belongs to the HesB/IscA family.
MADAR_583 protein networkhttps://string-db.org/network/1074889.MADAR_583Secreted protein containing DUF192; Annotation based on similarity to AA sequences in nr.
lgt protein networkhttps://string-db.org/network/1074889.MADAR_584Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the [...]
MADAR_585 protein networkhttps://string-db.org/network/1074889.MADAR_585Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.
acnA protein networkhttps://string-db.org/network/1074889.MADAR_586Aconitate hydratase; Annotation based on TIGRFAM aconitase_mito protein motif and similarity to AA sequences in nr.
MADAR_587 protein networkhttps://string-db.org/network/1074889.MADAR_587Alpha/beta superfamily hydrolase; Annotation based on TIGRFAM menH_SHCHC protein motif and similarity to AA sequences in nr.
pdxJ protein networkhttps://string-db.org/network/1074889.MADAR_588Pyridoxal phosphate biosynthetic protein; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate [...]
mscS protein networkhttps://string-db.org/network/1074889.MADAR_589MscS Mechanosensitive ion channel; Annotation based on similarity to AA sequences in nr.